LCSB-BioCore / COBREXA.jl

Constraint-Based Reconstruction and EXascale Analysis
https://lcsb-biocore.github.io/COBREXA.jl/
Apache License 2.0
42 stars 8 forks source link

Fix model accessor bugs #755

Closed stelmo closed 1 year ago

stelmo commented 1 year ago

Mostly spelling mistakes due to premature merging of PR by yours truly

codecov[bot] commented 1 year ago

Codecov Report

Base: 0.00% // Head: 88.49% // Increases project coverage by +88.49% :tada:

Coverage data is based on head (8f889c5) compared to base (844cd79). Patch coverage: 100.00% of modified lines in pull request are covered.

:exclamation: Current head 8f889c5 differs from pull request most recent head 0d6d49f. Consider uploading reports for the commit 0d6d49f to get more accurate results

Additional details and impacted files ```diff @@ Coverage Diff @@ ## next #755 +/- ## ========================================== + Coverage 0.00% 88.49% +88.49% ========================================== Files 87 88 +1 Lines 1978 2103 +125 ========================================== + Hits 0 1861 +1861 + Misses 1978 242 -1736 ``` | [Impacted Files](https://codecov.io/gh/LCSB-BioCore/COBREXA.jl/pull/755?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=LCSB-BioCore) | Coverage Δ | | |---|---|---| | [src/types/models/JSONModel.jl](https://codecov.io/gh/LCSB-BioCore/COBREXA.jl/pull/755?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=LCSB-BioCore#diff-c3JjL3R5cGVzL21vZGVscy9KU09OTW9kZWwuamw=) | `99.01% <100.00%> (+99.01%)` | :arrow_up: | | [src/types/models/SBMLModel.jl](https://codecov.io/gh/LCSB-BioCore/COBREXA.jl/pull/755?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=LCSB-BioCore#diff-c3JjL3R5cGVzL21vZGVscy9TQk1MTW9kZWwuamw=) | `92.08% <100.00%> (+92.08%)` | :arrow_up: | | [src/types/ReactionStatus.jl](https://codecov.io/gh/LCSB-BioCore/COBREXA.jl/pull/755?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=LCSB-BioCore#diff-c3JjL3R5cGVzL1JlYWN0aW9uU3RhdHVzLmps) | `100.00% <0.00%> (ø)` | | | [src/reconstruction/pipes/generic.jl](https://codecov.io/gh/LCSB-BioCore/COBREXA.jl/pull/755?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=LCSB-BioCore#diff-c3JjL3JlY29uc3RydWN0aW9uL3BpcGVzL2dlbmVyaWMuamw=) | `26.66% <0.00%> (+26.66%)` | :arrow_up: | | [src/types/FluxSummary.jl](https://codecov.io/gh/LCSB-BioCore/COBREXA.jl/pull/755?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=LCSB-BioCore#diff-c3JjL3R5cGVzL0ZsdXhTdW1tYXJ5Lmps) | `33.33% <0.00%> (+33.33%)` | :arrow_up: | | [src/types/FluxVariabilitySummary.jl](https://codecov.io/gh/LCSB-BioCore/COBREXA.jl/pull/755?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=LCSB-BioCore#diff-c3JjL3R5cGVzL0ZsdXhWYXJpYWJpbGl0eVN1bW1hcnkuamw=) | `33.33% <0.00%> (+33.33%)` | :arrow_up: | | [src/utils/looks\_like.jl](https://codecov.io/gh/LCSB-BioCore/COBREXA.jl/pull/755?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=LCSB-BioCore#diff-c3JjL3V0aWxzL2xvb2tzX2xpa2Uuamw=) | `44.44% <0.00%> (+44.44%)` | :arrow_up: | | [src/types/misc/simplified\_enzyme\_constrained.jl](https://codecov.io/gh/LCSB-BioCore/COBREXA.jl/pull/755?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=LCSB-BioCore#diff-c3JjL3R5cGVzL21pc2Mvc2ltcGxpZmllZF9lbnp5bWVfY29uc3RyYWluZWQuamw=) | `50.00% <0.00%> (+50.00%)` | :arrow_up: | | [src/types/accessors/ModelWrapper.jl](https://codecov.io/gh/LCSB-BioCore/COBREXA.jl/pull/755?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=LCSB-BioCore#diff-c3JjL3R5cGVzL2FjY2Vzc29ycy9Nb2RlbFdyYXBwZXIuamw=) | `57.14% <0.00%> (+57.14%)` | :arrow_up: | | [src/types/accessors/bits/semantics.jl](https://codecov.io/gh/LCSB-BioCore/COBREXA.jl/pull/755?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=LCSB-BioCore#diff-c3JjL3R5cGVzL2FjY2Vzc29ycy9iaXRzL3NlbWFudGljcy5qbA==) | `65.30% <0.00%> (+65.30%)` | :arrow_up: | | ... and [72 more](https://codecov.io/gh/LCSB-BioCore/COBREXA.jl/pull/755?src=pr&el=tree-more&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=LCSB-BioCore) | | Help us with your feedback. Take ten seconds to tell us [how you rate us](https://about.codecov.io/nps?utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=LCSB-BioCore). Have a feature suggestion? [Share it here.](https://app.codecov.io/gh/feedback/?utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=LCSB-BioCore)

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