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LCSB-BioCore / FBCModelTests.jl

Tests for constraint-based metabolic models
https://lcsb-biocore.github.io/FBCModelTests.jl/stable/
Apache License 2.0
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parallelization params to run-frog #82

Open mihai-sysbio opened 1 year ago

mihai-sysbio commented 1 year ago

While trying to run fbcmodeltests-run-frog via Docker on Human-GEM, it took way too many hours to compute with the default settings, so I tried for a little to manually add workers and failed. It would be great to allow passing of parallelization params to run-frog, since the underlying function FROG.generate_report already has support for it.

exaexa commented 1 year ago

True, we omitted the parameter so far because the script was meant to be a completely simple wrapper... will add asap.