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LHNCBC / SemRep

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Installation Error #7

Open AyaAq opened 2 years ago

AyaAq commented 2 years ago

Hi, I am getting this error when trying to install SemRep: cp: cannot stat '/home/hadoop_admin/Aya/public_semrep/DATA/LEXICON/2018': No such file or directory

The installation completes, but I was wondering if this will affect the performance, and why is it happening? I checked DATA/LEXICON there isnt a folder named 2018. I noticed the only file I get when I "tar" the 2018 lexicon is named "lex_rec".

I downloaded lexicons and semrep from this link: https://lhncbc.nlm.nih.gov/ii/tools/SemRep_SemMedDB_SKR/SemRep_download.html

kilicogluh commented 2 years ago

Apologies for the late response. I believe that won't affect the performance.

liwenqingi commented 1 year ago

When I tried to use following command: ../bin/semrep.v1.8 -L 2018 -Z 2018AA test.ml I got this error: **! System error ! 'dlopen("/home/liwenqing1/Package/semrep/public_semrep/bin/abgenemod.so") failed in load_foreign_resource/1: libpcre.so.1: 无法打开共享对象文件: 没有那个文件或目录'

! Existence error in argument 1 of unload_foreign_resource/1 ! resource abgenemod does not exist ! goal: unload_foreign_resource(abgenemod)**

And my glibc version is 2.3.1.

kilicogluh commented 1 year ago

See the issue here: https://github.com/lhncbc/SemRep/issues/3.