from the command line and choosing not to use z-score, the design is being shown and it has the constant white. However, when reviewing the design in the LIMO plot GUI, the constant is in black. This does not happen if one chooses to z-score regressors (constant is white in both cases). See screen captures.
When using the function
limo_random_robust
from the command line and choosing not to use z-score, the design is being shown and it has the constant white. However, when reviewing the design in the LIMO plot GUI, the constant is in black. This does not happen if one chooses to z-score regressors (constant is white in both cases). See screen captures.