After CGAL's delaunay meshing, it appears that some vertices are disconnected. The incidence degree should be two for a properly connected vertex.
added warning in the code until this is resolved
> TriMeshPeriodic::periodicDelaunay()... Done! created 5711 triangles (out of 50490 periodic ones)!
> Warning: found a vertex with low incidence: vertex[46] = (16.0459, 3.87606, 0), incidence = (0, raw = 0)
and
2022-04-18 21:49:23,796 [WARNING] memsurfer.trimesh:compute_delaunay - Found vertices with small incidence: [ 46 767] = [0 1]
[[16.045897 3.876062]
[29.536968 37.83923 ]]
After CGAL's delaunay meshing, it appears that some vertices are disconnected. The incidence degree should be two for a properly connected vertex.
added warning in the code until this is resolved
and