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CMake Generate step failed. Build files cannot be regenerated correctly. #218

Closed Edithnuaa closed 1 year ago

Edithnuaa commented 1 year ago

Configuring Spheral failed.

COMMAND: python3 scripts/devtools/host-config-build.py --host-config linux-ubuntu22.04-cortex_a72-gcc.cmake

Output:

Namespace(host_config='linux-ubuntu22.04-cortex_a72-gcc.cmake', source_dir='/home/ubuntu/SPHERAL/Spheral', install_dir='', build=False, lc_modules='', D=[])
[exe: grep 'CMake executable' "/home/ubuntu/SPHERAL/Spheral/linux-ubuntu22.04-cortex_a72-gcc.cmake"]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
~ Host-config:      /home/ubuntu/SPHERAL/Spheral/linux-ubuntu22.04-cortex_a72-gcc.cmake
~ Build Dir:        /home/ubuntu/SPHERAL/Spheral/build_linux-ubuntu22.04-cortex_a72-gcc/build
~ Install Dir:      /home/ubuntu/SPHERAL/Spheral/build_linux-ubuntu22.04-cortex_a72-gcc/install
~ Source Dir:       /home/ubuntu/SPHERAL/Spheral
~ Cmake cmd:        /usr/bin/cmake
~ Extra CMake Args: 
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~

[exe: rm -rf "/home/ubuntu/SPHERAL/Spheral/build_linux-ubuntu22.04-cortex_a72-gcc/build" 2>/dev/null]
[exe: rm -rf "/home/ubuntu/SPHERAL/Spheral/build_linux-ubuntu22.04-cortex_a72-gcc/install" 2>/dev/null]
[exe: mkdir -p "/home/ubuntu/SPHERAL/Spheral/build_linux-ubuntu22.04-cortex_a72-gcc/build"]
[exe: mkdir -p "/home/ubuntu/SPHERAL/Spheral/build_linux-ubuntu22.04-cortex_a72-gcc/install"]
Warning: No LC_MODULES set, ensure appropriate compilers are in path or you may experience incorrect builds!
loading initial cache file /home/ubuntu/SPHERAL/Spheral/linux-ubuntu22.04-cortex_a72-gcc.cmake
-- The CXX compiler identification is GNU 11.3.0
-- The Fortran compiler identification is GNU 11.3.0
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Check for working CXX compiler: /usr/bin/g++ - skipped
-- Detecting CXX compile features
-- Detecting CXX compile features - done
-- Detecting Fortran compiler ABI info
-- Detecting Fortran compiler ABI info - done
-- Check for working Fortran compiler: /usr/bin/gfortran - skipped
-- C++ Compiler ID: GNU
-- Compiler warnings ON
-- Compiler unused variable warnings ON
-- Compiler unused parameter warnings OFF
-- Compiler missing include dir warnings ON
-- using warning flags -Wno-unused-parameter
-- Fortran flags:  -Wno-missing-include-dirs
-- BLT Version: 0.4.1
-- CMake Version: 3.22.1
-- CMake Executable: /usr/bin/cmake
CMake Deprecation Warning at cmake/blt/SetupBLT.cmake:73 (cmake_policy):
  The OLD behavior for policy CMP0076 will be removed from a future version
  of CMake.

  The cmake-policies(7) manual explains that the OLD behaviors of all
  policies are deprecated and that a policy should be set to OLD only under
  specific short-term circumstances.  Projects should be ported to the NEW
  behavior and not rely on setting a policy to OLD.
Call Stack (most recent call first):
  cmake/SetupSpheral.cmake:37 (include)
  CMakeLists.txt:9 (include)

-- Found Git: /usr/bin/git (found version "2.34.1") 
-- Git Support is ON
-- Git Executable: /usr/bin/git
-- Git Version: 2.34.1
-- MPI Support is ON
-- FindMPI Enabled  (ENABLE_FIND_MPI == ON)
-- Found MPI_CXX: /usr/lib/aarch64-linux-gnu/libmpichcxx.so (found version "4.0") 
-- Found MPI_Fortran: /usr/lib/aarch64-linux-gnu/libmpichfort.so (found version "4.0") 
-- Found MPI: TRUE (found version "4.0")  
-- BLT MPI Compile Flags:  -flto=auto;-ffat-lto-objects;-flto=auto;-ffile-prefix-map=/build/mpich-vI2bLv/mpich-4.0=.;-flto=auto;-ffat-lto-objects;-flto=auto;-ffat-lto-objects;-fallow-invalid-boz;-fallow-argument-mismatch;-flto=auto;-ffat-lto-objects;-flto=auto
-- BLT MPI Include Paths:  /usr/include/aarch64-linux-gnu/mpich
-- BLT MPI Libraries:      /usr/lib/aarch64-linux-gnu/libmpichcxx.so;/usr/lib/aarch64-linux-gnu/libmpich.so;/usr/lib/aarch64-linux-gnu/libmpichfort.so
-- BLT MPI Link Flags:     SHELL:-Wl,-Bsymbolic-functions
-- MPI Executable:       /usr/bin/mpirun
-- MPI Num Proc Flag:    -np
-- MPI Command Append:   
-- Using MPI Fortran header: mpif.h
-- OpenMP Support is ON
-- Found OpenMP_CXX: -fopenmp (found version "4.5") 
-- Found OpenMP_Fortran: -fopenmp (found version "4.5") 
-- Found OpenMP: TRUE (found version "4.5")  
-- OpenMP Compile Flags: -fopenmp
-- OpenMP Link Flags:    -fopenmp
-- CUDA Support is OFF
-- HIP Support is OFF
-- HCC Support is OFF
-- Could NOT find Doxygen (missing: DOXYGEN_EXECUTABLE) 
-- Sphinx support is ON
-- Failed to locate Sphinx executable (missing: SPHINX_EXECUTABLE) 
-- Valgrind support is ON
-- Failed to locate Valgrind executable (missing: VALGRIND_EXECUTABLE) 
-- AStyle support is ON
-- Failed to locate AStyle executable (missing: ASTYLE_EXECUTABLE) 
-- ClangFormat support is ON
-- Failed to locate ClangFormat executable (missing: CLANGFORMAT_EXECUTABLE) 
-- Uncrustify support is ON
-- Failed to locate Uncrustify executable (missing: UNCRUSTIFY_EXECUTABLE) 
-- Yapf support is ON
-- Failed to locate Yapf executable (missing: YAPF_EXECUTABLE) 
-- CMakeFormat support is ON
-- Failed to locate CMakeFormat executable (missing: CMAKEFORMAT_EXECUTABLE) 
-- Cppcheck support is ON
-- Failed to locate Cppcheck executable (missing: CPPCHECK_EXECUTABLE) 
-- ClangQuery support is ON
-- Failed to locate ClangQuery executable (missing: CLANGQUERY_EXECUTABLE) 
-- ClangTidy support is ON
-- Failed to locate ClangTidy executable (missing: CLANGTIDY_EXECUTABLE) 
-- C Compiler family is GNU
-- Fortran Compiler family is GNU
-- Adding optional BLT definitions and compiler flags
-- Setting CMAKE_CXX_EXTENSIONS to Off
-- Enabling all compiler warnings on all targets.
-- Fortran support enabled.
-- CMAKE_C_FLAGS flags are:    -Wall -Wextra 
-- CMAKE_CXX_FLAGS flags are:    -Wall -Wextra 
-- CMAKE_Fortran_FLAGS flags are:   -Wno-missing-include-dirs
-- CMAKE_EXE_LINKER_FLAGS flags are:  
-- Google Test Support is ON
-- Google Mock Support is OFF
-- The C compiler identification is GNU 11.3.0
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Check for working C compiler: /usr/bin/gcc - skipped
-- Detecting C compile features
-- Detecting C compile features - done
CMake Deprecation Warning at cmake/blt/thirdparty_builtin/googletest-master-2020-01-07/googletest/CMakeLists.txt:56 (cmake_minimum_required):
  Compatibility with CMake < 2.8.12 will be removed from a future version of
  CMake.

  Update the VERSION argument <min> value or use a ...<max> suffix to tell
  CMake that the project does not need compatibility with older versions.

-- Found PythonInterp: /usr/bin/python3.10 (found version "3.10.6") 
-- Looking for pthread.h
-- Looking for pthread.h - found
-- Performing Test CMAKE_HAVE_LIBC_PTHREAD
-- Performing Test CMAKE_HAVE_LIBC_PTHREAD - Success
-- Found Threads: TRUE  
-- Fruit Support is ON
-- Fruit MPI Support is OFF
-- Setting build type to 'Release' as none was specified.
-- Could NOT find Python3 (missing: Python3_INCLUDE_DIRS Development Development.Module Development.Embed) (found version "3.10.6")
-- Could NOT find Python3 (missing: Python3_INCLUDE_DIRS Development Development.Module Development.Embed) (found version "3.10.6")
-- pybind11 v2.9.0 
-- Found PythonLibs: python3.10
-- Performing Test HAS_FLTO
-- Performing Test HAS_FLTO - Success
Default TPL location : /home/ubuntu/SPHERAL/Spheral/build_linux-ubuntu22.04-cortex_a72-gcc/build/Spheral/tpl

zlib_DIR set.
Searching zlib for : /home/ubuntu/SPHERAL/spheral-spack-tpls/spack/opt/spack/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_place/linux-ubuntu22.04-cortex_a72/gcc-11.3.0/zlib-1.2.11-awnywwwnug464h5j4gt6tuujo2qvemna
Found: /home/ubuntu/SPHERAL/spheral-spack-tpls/spack/opt/spack/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_place/linux-ubuntu22.04-cortex_a72/gcc-11.3.0/zlib-1.2.11-awnywwwnug464h5j4gt6tuujo2qvemna/lib/libz.so

boost_DIR set.
Searching boost for : /home/ubuntu/SPHERAL/spheral-spack-tpls/spack/opt/spack/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_place/linux-ubuntu22.04-cortex_a72/gcc-11.3.0/boost-1.74.0-7yoahdeumxdflfhtdyqz6eesd2mxbyvj
Found: /home/ubuntu/SPHERAL/spheral-spack-tpls/spack/opt/spack/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_place/linux-ubuntu22.04-cortex_a72/gcc-11.3.0/boost-1.74.0-7yoahdeumxdflfhtdyqz6eesd2mxbyvj/lib/libboost_filesystem.so
Found: /home/ubuntu/SPHERAL/spheral-spack-tpls/spack/opt/spack/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_place/linux-ubuntu22.04-cortex_a72/gcc-11.3.0/boost-1.74.0-7yoahdeumxdflfhtdyqz6eesd2mxbyvj/lib/libboost_filesystem.so

eigen_DIR set.
Searching eigen for : /home/ubuntu/SPHERAL/spheral-spack-tpls/spack/opt/spack/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_place/linux-ubuntu22.04-cortex_a72/gcc-11.3.0/eigen-3.4.0-ufra3beku2di3ryqjhhqpxd34qdx2ppb

qhull_DIR set.
Searching qhull for : /home/ubuntu/SPHERAL/spheral-spack-tpls/spack/opt/spack/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_place/linux-ubuntu22.04-cortex_a72/gcc-11.3.0/qhull-2020.1-glpmnqpqdwjyzyonuapmu6xj3bnejscj
Found: /home/ubuntu/SPHERAL/spheral-spack-tpls/spack/opt/spack/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_place/linux-ubuntu22.04-cortex_a72/gcc-11.3.0/qhull-2020.1-glpmnqpqdwjyzyonuapmu6xj3bnejscj/lib/libqhullstatic.a

silo_DIR set.
Searching silo for : /home/ubuntu/SPHERAL/spheral-spack-tpls/spack/opt/spack/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_place/linux-ubuntu22.04-cortex_a72/gcc-11.3.0/silo-4.10.2-ou6oqfeuei3gfyy2vyn3jv7rbzzp3so7
Found: /home/ubuntu/SPHERAL/spheral-spack-tpls/spack/opt/spack/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_place/linux-ubuntu22.04-cortex_a72/gcc-11.3.0/silo-4.10.2-ou6oqfeuei3gfyy2vyn3jv7rbzzp3so7/lib/libsiloh5.a

-- Found HDF5: /home/ubuntu/SPHERAL/spheral-spack-tpls/spack/opt/spack/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_place/linux-ubuntu22.04-cortex_a72/gcc-11.3.0/hdf5-1.8.19-tvjshudcnb2uwkwstfysdfe6vc3pcnlc/lib/libhdf5.so (found version "1.8.19")  
-- Found Conduit: /home/ubuntu/SPHERAL/spheral-spack-tpls/spack/opt/spack/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_place/linux-ubuntu22.04-cortex_a72/gcc-11.3.0/conduit-0.8.2-bbn6sg3dfoas75cw7jpkta42vblu6z5t (found version 0.8.2)
-- Found axom: /home/ubuntu/SPHERAL/spheral-spack-tpls/spack/opt/spack/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_place/linux-ubuntu22.04-cortex_a72/gcc-11.3.0/axom-0.5.0-tudlxbsqf6lcdpiy6czmfnulr4kmcc2h/lib/cmake (found version v0.5.0)
hdf5_DIR set.
Searching hdf5 for : /home/ubuntu/SPHERAL/spheral-spack-tpls/spack/opt/spack/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_place/linux-ubuntu22.04-cortex_a72/gcc-11.3.0/hdf5-1.8.19-tvjshudcnb2uwkwstfysdfe6vc3pcnlc
Found: /home/ubuntu/SPHERAL/spheral-spack-tpls/spack/opt/spack/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_place/linux-ubuntu22.04-cortex_a72/gcc-11.3.0/hdf5-1.8.19-tvjshudcnb2uwkwstfysdfe6vc3pcnlc/lib/libhdf5.so
Found: /home/ubuntu/SPHERAL/spheral-spack-tpls/spack/opt/spack/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_place/linux-ubuntu22.04-cortex_a72/gcc-11.3.0/hdf5-1.8.19-tvjshudcnb2uwkwstfysdfe6vc3pcnlc/lib/libhdf5.so

aneos_DIR set.
Searching aneos for : /home/ubuntu/SPHERAL/spheral-spack-tpls/spack/opt/spack/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_place/linux-ubuntu22.04-cortex_a72/gcc-11.3.0/m-aneos-1.0-6otlo7reruyuu3bwcbz6p7j4hnradz5k
Found: /home/ubuntu/SPHERAL/spheral-spack-tpls/spack/opt/spack/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_place/linux-ubuntu22.04-cortex_a72/gcc-11.3.0/m-aneos-1.0-6otlo7reruyuu3bwcbz6p7j4hnradz5k/lib/libaneos.a

opensubdiv_DIR set.
Searching opensubdiv for : /home/ubuntu/SPHERAL/spheral-spack-tpls/spack/opt/spack/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_place/linux-ubuntu22.04-cortex_a72/gcc-11.3.0/opensubdiv-3.4.3-rwhprfxa7woqlektww2ssllgb4k4vhif
Found: /home/ubuntu/SPHERAL/spheral-spack-tpls/spack/opt/spack/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_place/linux-ubuntu22.04-cortex_a72/gcc-11.3.0/opensubdiv-3.4.3-rwhprfxa7woqlektww2ssllgb4k4vhif/lib/libosdCPU.a

python_DIR set.
Searching python for : /home/ubuntu/SPHERAL/spheral-spack-tpls/spack/opt/spack/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_place/linux-ubuntu22.04-cortex_a72/gcc-11.3.0/python-3.9.10-oclbijibskzsscbvmhochdpj45uzujov
Found: /usr/lib/python3.10/config-3.10-aarch64-linux-gnu/libpython3.10.so

polytope_DIR set.
Searching polytope for : /home/ubuntu/SPHERAL/spheral-spack-tpls/spack/opt/spack/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_place/linux-ubuntu22.04-cortex_a72/gcc-11.3.0/polytope-0.7.3-4mfb5zzqn3grfzwkoyc5pf5nlq7gh3bg
Found: /home/ubuntu/SPHERAL/spheral-spack-tpls/spack/opt/spack/__spack_path_placeholder__/__spack_path_placeholder__/__spack_path_place/linux-ubuntu22.04-cortex_a72/gcc-11.3.0/polytope-0.7.3-4mfb5zzqn3grfzwkoyc5pf5nlq7gh3bg/lib/libpolytope.a

-- DBC (design by contract) off
-- bound checking disabled
-- Helmholtz equation of state enabled
-- ANEOS enabled
-- Sphinx /bin/sphinx-build
-- Configuring done
CMake Error in src/CMakeLists.txt:
  Found relative path while evaluating include directories of "Spheral_CXX":

    "_Python3_INCLUDE_DIR-NOTFOUND"

CMake Error in src/CMakeLists.txt:
  Found relative path while evaluating include directories of "Spheral_CXX":

    "_Python3_INCLUDE_DIR-NOTFOUND"

CMake Error in src/ArtificialViscosity/CMakeLists.txt:
  Found relative path while evaluating include directories of
  "Spheral_ArtificialViscosity":

    "_Python3_INCLUDE_DIR-NOTFOUND"

CMake Error in src/ArtificialConduction/CMakeLists.txt:
  Found relative path while evaluating include directories of
  "Spheral_ArtificialConduction":

    "_Python3_INCLUDE_DIR-NOTFOUND"

CMake Error in src/Boundary/CMakeLists.txt:
  Found relative path while evaluating include directories of
  "Spheral_Boundary":

    "_Python3_INCLUDE_DIR-NOTFOUND"

CMake Error in src/CRKSPH/CMakeLists.txt:
  Found relative path while evaluating include directories of
  "Spheral_CRKSPH":

    "_Python3_INCLUDE_DIR-NOTFOUND"

CMake Error in src/CXXTests/CMakeLists.txt:
  Found relative path while evaluating include directories of
  "spheral_cuda_test":

    "_Python3_INCLUDE_DIR-NOTFOUND"

CMake Error in src/CXXTests/DeviceTestLib/CMakeLists.txt:
  Found relative path while evaluating include directories of
  "Spheral_DeviceTestLib":

    "_Python3_INCLUDE_DIR-NOTFOUND"

CMake Error in src/Damage/CMakeLists.txt:
  Found relative path while evaluating include directories of
  "Spheral_Damage":

    "_Python3_INCLUDE_DIR-NOTFOUND"

CMake Error in src/DataBase/CMakeLists.txt:
  Found relative path while evaluating include directories of
  "Spheral_DataBase":

    "_Python3_INCLUDE_DIR-NOTFOUND"

CMake Error in src/DataOutput/CMakeLists.txt:
  Found relative path while evaluating include directories of
  "Spheral_DataOutput":

    "_Python3_INCLUDE_DIR-NOTFOUND"

CMake Error in src/DEM/CMakeLists.txt:
  Found relative path while evaluating include directories of "Spheral_DEM":

    "_Python3_INCLUDE_DIR-NOTFOUND"

CMake Error in src/Distributed/CMakeLists.txt:
  Found relative path while evaluating include directories of
  "Spheral_Distributed":

    "_Python3_INCLUDE_DIR-NOTFOUND"

CMake Error in src/ExternalForce/CMakeLists.txt:
  Found relative path while evaluating include directories of
  "Spheral_ExternalForce":

    "_Python3_INCLUDE_DIR-NOTFOUND"

CMake Error in src/Field/CMakeLists.txt:
  Found relative path while evaluating include directories of
  "Spheral_Field":

    "_Python3_INCLUDE_DIR-NOTFOUND"

CMake Error in src/FieldOperations/CMakeLists.txt:
  Found relative path while evaluating include directories of
  "Spheral_FieldOperations":

    "_Python3_INCLUDE_DIR-NOTFOUND"

CMake Error in src/FileIO/CMakeLists.txt:
  Found relative path while evaluating include directories of
  "Spheral_FileIO":

    "_Python3_INCLUDE_DIR-NOTFOUND"

CMake Error in src/FSISPH/CMakeLists.txt:
  Found relative path while evaluating include directories of
  "Spheral_FSISPH":

    "_Python3_INCLUDE_DIR-NOTFOUND"

CMake Error in src/Geometry/CMakeLists.txt:
  Found relative path while evaluating include directories of
  "Spheral_Geometry":

    "_Python3_INCLUDE_DIR-NOTFOUND"

CMake Error in src/Gravity/CMakeLists.txt:
  Found relative path while evaluating include directories of
  "Spheral_Gravity":

    "_Python3_INCLUDE_DIR-NOTFOUND"

CMake Error in src/Hydro/CMakeLists.txt:
  Found relative path while evaluating include directories of
  "Spheral_Hydro":

    "_Python3_INCLUDE_DIR-NOTFOUND"

CMake Error in src/Integrator/CMakeLists.txt:
  Found relative path while evaluating include directories of
  "Spheral_Integrator":

    "_Python3_INCLUDE_DIR-NOTFOUND"

CMake Error in src/Kernel/CMakeLists.txt:
  Found relative path while evaluating include directories of
  "Spheral_Kernel":

    "_Python3_INCLUDE_DIR-NOTFOUND"

CMake Error in src/KernelIntegrator/CMakeLists.txt:
  Found relative path while evaluating include directories of
  "Spheral_KernelIntegrator":

    "_Python3_INCLUDE_DIR-NOTFOUND"

CMake Error in src/Material/CMakeLists.txt:
  Found relative path while evaluating include directories of
  "Spheral_Material":

    "_Python3_INCLUDE_DIR-NOTFOUND"

CMake Error in src/Material/CMakeLists.txt:
  Found relative path while evaluating include directories of
  "Spheral_Material":

    "_Python3_INCLUDE_DIR-NOTFOUND"

CMake Error in src/Material/CMakeLists.txt:
  Found relative path while evaluating include directories of
  "Spheral_Material":

    "_Python3_INCLUDE_DIR-NOTFOUND"

CMake Error in src/Mesh/CMakeLists.txt:
  Found relative path while evaluating include directories of "Spheral_Mesh":

    "_Python3_INCLUDE_DIR-NOTFOUND"

CMake Error in src/Neighbor/CMakeLists.txt:
  Found relative path while evaluating include directories of
  "Spheral_Neighbor":

    "_Python3_INCLUDE_DIR-NOTFOUND"

CMake Error in src/NodeGenerators/CMakeLists.txt:
  Found relative path while evaluating include directories of
  "Spheral_NodeGenerators":

    "_Python3_INCLUDE_DIR-NOTFOUND"

CMake Error in src/NodeList/CMakeLists.txt:
  Found relative path while evaluating include directories of
  "Spheral_NodeList":

    "_Python3_INCLUDE_DIR-NOTFOUND"

CMake Error in src/Physics/CMakeLists.txt:
  Found relative path while evaluating include directories of
  "Spheral_Physics":

    "_Python3_INCLUDE_DIR-NOTFOUND"

CMake Error in src/RK/CMakeLists.txt:
  Found relative path while evaluating include directories of "Spheral_RK":

    "_Python3_INCLUDE_DIR-NOTFOUND"

CMake Error in src/GSPH/CMakeLists.txt:
  Found relative path while evaluating include directories of "Spheral_GSPH":

    "_Python3_INCLUDE_DIR-NOTFOUND"

CMake Error in src/SolidMaterial/CMakeLists.txt:
  Found relative path while evaluating include directories of
  "Spheral_SolidMaterial":

    "_Python3_INCLUDE_DIR-NOTFOUND"

CMake Error in src/SolidMaterial/CMakeLists.txt:
  Found relative path while evaluating include directories of
  "Spheral_SolidMaterial":

    "_Python3_INCLUDE_DIR-NOTFOUND"

CMake Error in src/SolidMaterial/CMakeLists.txt:
  Found relative path while evaluating include directories of
  "Spheral_SolidMaterial":

    "_Python3_INCLUDE_DIR-NOTFOUND"

CMake Error in src/SPH/CMakeLists.txt:
  Found relative path while evaluating include directories of "Spheral_SPH":

    "_Python3_INCLUDE_DIR-NOTFOUND"

CMake Error in src/Strength/CMakeLists.txt:
  Found relative path while evaluating include directories of
  "Spheral_Strength":

    "_Python3_INCLUDE_DIR-NOTFOUND"

CMake Error in src/SVPH/CMakeLists.txt:
  Found relative path while evaluating include directories of "Spheral_SVPH":

    "_Python3_INCLUDE_DIR-NOTFOUND"

CMake Error in src/Utilities/CMakeLists.txt:
  Found relative path while evaluating include directories of
  "Spheral_Utilities":

    "_Python3_INCLUDE_DIR-NOTFOUND"

CMake Error in src/PYB11/CXXTypes/CMakeLists.txt:
  Target "Spheral_CXX" contains relative path in its
  INTERFACE_INCLUDE_DIRECTORIES:

    "_Python3_INCLUDE_DIR-NOTFOUND"

CMake Error in src/PYB11/CXXTests/CMakeLists.txt:
  Target "Spheral_CXX" contains relative path in its
  INTERFACE_INCLUDE_DIRECTORIES:

    "_Python3_INCLUDE_DIR-NOTFOUND"

CMake Error in src/PYB11/Geometry/CMakeLists.txt:
  Target "Spheral_CXX" contains relative path in its
  INTERFACE_INCLUDE_DIRECTORIES:

    "_Python3_INCLUDE_DIR-NOTFOUND"

CMake Error in src/PYB11/Silo/CMakeLists.txt:
  Target "Spheral_CXX" contains relative path in its
  INTERFACE_INCLUDE_DIRECTORIES:

    "_Python3_INCLUDE_DIR-NOTFOUND"

CMake Error in src/PYB11/DataOutput/CMakeLists.txt:
  Target "Spheral_CXX" contains relative path in its
  INTERFACE_INCLUDE_DIRECTORIES:

    "_Python3_INCLUDE_DIR-NOTFOUND"

CMake Error in src/PYB11/NodeList/CMakeLists.txt:
  Target "Spheral_CXX" contains relative path in its
  INTERFACE_INCLUDE_DIRECTORIES:

    "_Python3_INCLUDE_DIR-NOTFOUND"

CMake Error in src/PYB11/Field/CMakeLists.txt:
  Target "Spheral_CXX" contains relative path in its
  INTERFACE_INCLUDE_DIRECTORIES:

    "_Python3_INCLUDE_DIR-NOTFOUND"

CMake Error in src/PYB11/FieldList/CMakeLists.txt:
  Target "Spheral_CXX" contains relative path in its
  INTERFACE_INCLUDE_DIRECTORIES:

    "_Python3_INCLUDE_DIR-NOTFOUND"

CMake Error in src/PYB11/Kernel/CMakeLists.txt:
  Target "Spheral_CXX" contains relative path in its
  INTERFACE_INCLUDE_DIRECTORIES:

    "_Python3_INCLUDE_DIR-NOTFOUND"

CMake Error in src/PYB11/Neighbor/CMakeLists.txt:
  Target "Spheral_CXX" contains relative path in its
  INTERFACE_INCLUDE_DIRECTORIES:

    "_Python3_INCLUDE_DIR-NOTFOUND"

CMake Error in src/PYB11/Material/CMakeLists.txt:
  Target "Spheral_CXX" contains relative path in its
  INTERFACE_INCLUDE_DIRECTORIES:

    "_Python3_INCLUDE_DIR-NOTFOUND"

CMake Error in src/PYB11/FileIO/CMakeLists.txt:
  Target "Spheral_CXX" contains relative path in its
  INTERFACE_INCLUDE_DIRECTORIES:

    "_Python3_INCLUDE_DIR-NOTFOUND"

CMake Error in src/PYB11/Utilities/CMakeLists.txt:
  Target "Spheral_CXX" contains relative path in its
  INTERFACE_INCLUDE_DIRECTORIES:

    "_Python3_INCLUDE_DIR-NOTFOUND"

CMake Error in src/PYB11/RK/CMakeLists.txt:
  Target "Spheral_CXX" contains relative path in its
  INTERFACE_INCLUDE_DIRECTORIES:

    "_Python3_INCLUDE_DIR-NOTFOUND"

CMake Error in src/PYB11/DataBase/CMakeLists.txt:
  Target "Spheral_CXX" contains relative path in its
  INTERFACE_INCLUDE_DIRECTORIES:

    "_Python3_INCLUDE_DIR-NOTFOUND"

CMake Error in src/PYB11/Boundary/CMakeLists.txt:
  Target "Spheral_CXX" contains relative path in its
  INTERFACE_INCLUDE_DIRECTORIES:

    "_Python3_INCLUDE_DIR-NOTFOUND"

CMake Error in src/PYB11/Physics/CMakeLists.txt:
  Target "Spheral_CXX" contains relative path in its
  INTERFACE_INCLUDE_DIRECTORIES:

    "_Python3_INCLUDE_DIR-NOTFOUND"

CMake Error in src/PYB11/Hydro/CMakeLists.txt:
  Target "Spheral_CXX" contains relative path in its
  INTERFACE_INCLUDE_DIRECTORIES:

    "_Python3_INCLUDE_DIR-NOTFOUND"

CMake Error in src/PYB11/ExternalForce/CMakeLists.txt:
  Target "Spheral_CXX" contains relative path in its
  INTERFACE_INCLUDE_DIRECTORIES:

    "_Python3_INCLUDE_DIR-NOTFOUND"

CMake Error in src/PYB11/Gravity/CMakeLists.txt:
  Target "Spheral_CXX" contains relative path in its
  INTERFACE_INCLUDE_DIRECTORIES:

    "_Python3_INCLUDE_DIR-NOTFOUND"

CMake Error in src/PYB11/Integrator/CMakeLists.txt:
  Target "Spheral_CXX" contains relative path in its
  INTERFACE_INCLUDE_DIRECTORIES:

    "_Python3_INCLUDE_DIR-NOTFOUND"

CMake Error in src/PYB11/NodeGenerators/CMakeLists.txt:
  Target "Spheral_CXX" contains relative path in its
  INTERFACE_INCLUDE_DIRECTORIES:

    "_Python3_INCLUDE_DIR-NOTFOUND"

CMake Error in src/PYB11/FieldOperations/CMakeLists.txt:
  Target "Spheral_CXX" contains relative path in its
  INTERFACE_INCLUDE_DIRECTORIES:

    "_Python3_INCLUDE_DIR-NOTFOUND"

CMake Error in src/PYB11/SPH/CMakeLists.txt:
  Target "Spheral_CXX" contains relative path in its
  INTERFACE_INCLUDE_DIRECTORIES:

    "_Python3_INCLUDE_DIR-NOTFOUND"

CMake Error in src/PYB11/CRKSPH/CMakeLists.txt:
  Target "Spheral_CXX" contains relative path in its
  INTERFACE_INCLUDE_DIRECTORIES:

    "_Python3_INCLUDE_DIR-NOTFOUND"

CMake Error in src/PYB11/SVPH/CMakeLists.txt:
  Target "Spheral_CXX" contains relative path in its
  INTERFACE_INCLUDE_DIRECTORIES:

    "_Python3_INCLUDE_DIR-NOTFOUND"

CMake Error in src/PYB11/DEM/CMakeLists.txt:
  Target "Spheral_CXX" contains relative path in its
  INTERFACE_INCLUDE_DIRECTORIES:

    "_Python3_INCLUDE_DIR-NOTFOUND"

CMake Error in src/PYB11/GSPH/CMakeLists.txt:
  Target "Spheral_CXX" contains relative path in its
  INTERFACE_INCLUDE_DIRECTORIES:

    "_Python3_INCLUDE_DIR-NOTFOUND"

CMake Error in src/PYB11/FSISPH/CMakeLists.txt:
  Target "Spheral_CXX" contains relative path in its
  INTERFACE_INCLUDE_DIRECTORIES:

    "_Python3_INCLUDE_DIR-NOTFOUND"

CMake Error in src/PYB11/ArtificialViscosity/CMakeLists.txt:
  Target "Spheral_CXX" contains relative path in its
  INTERFACE_INCLUDE_DIRECTORIES:

    "_Python3_INCLUDE_DIR-NOTFOUND"

CMake Error in src/PYB11/Mesh/CMakeLists.txt:
  Target "Spheral_CXX" contains relative path in its
  INTERFACE_INCLUDE_DIRECTORIES:

    "_Python3_INCLUDE_DIR-NOTFOUND"

CMake Error in src/PYB11/Damage/CMakeLists.txt:
  Target "Spheral_CXX" contains relative path in its
  INTERFACE_INCLUDE_DIRECTORIES:

    "_Python3_INCLUDE_DIR-NOTFOUND"

CMake Error in src/PYB11/SolidMaterial/CMakeLists.txt:
  Target "Spheral_CXX" contains relative path in its
  INTERFACE_INCLUDE_DIRECTORIES:

    "_Python3_INCLUDE_DIR-NOTFOUND"

CMake Error in src/PYB11/Strength/CMakeLists.txt:
  Target "Spheral_CXX" contains relative path in its
  INTERFACE_INCLUDE_DIRECTORIES:

    "_Python3_INCLUDE_DIR-NOTFOUND"

CMake Error in src/PYB11/ArtificialConduction/CMakeLists.txt:
  Target "Spheral_CXX" contains relative path in its
  INTERFACE_INCLUDE_DIRECTORIES:

    "_Python3_INCLUDE_DIR-NOTFOUND"

CMake Error in src/PYB11/KernelIntegrator/CMakeLists.txt:
  Target "Spheral_CXX" contains relative path in its
  INTERFACE_INCLUDE_DIRECTORIES:

    "_Python3_INCLUDE_DIR-NOTFOUND"

CMake Error in src/PYB11/polytope/CMakeLists.txt:
  Target "Spheral_CXX" contains relative path in its
  INTERFACE_INCLUDE_DIRECTORIES:

    "_Python3_INCLUDE_DIR-NOTFOUND"

CMake Error in src/PYB11/OpenMP/CMakeLists.txt:
  Target "Spheral_CXX" contains relative path in its
  INTERFACE_INCLUDE_DIRECTORIES:

    "_Python3_INCLUDE_DIR-NOTFOUND"

CMake Error in src/PYB11/Distributed/CMakeLists.txt:
  Target "Spheral_CXX" contains relative path in its
  INTERFACE_INCLUDE_DIRECTORIES:

    "_Python3_INCLUDE_DIR-NOTFOUND"

CMake Error in src/PYB11/ANEOS/CMakeLists.txt:
  Target "Spheral_CXX" contains relative path in its
  INTERFACE_INCLUDE_DIRECTORIES:

    "_Python3_INCLUDE_DIR-NOTFOUND"

CMake Error in src/PYB11/Helmholtz/CMakeLists.txt:
  Target "Spheral_CXX" contains relative path in its
  INTERFACE_INCLUDE_DIRECTORIES:

    "_Python3_INCLUDE_DIR-NOTFOUND"

-- Generating done
CMake Generate step failed.  Build files cannot be regenerated correctly.
Edithnuaa commented 1 year ago

Solution: install package: python3-dev sudo apt install python3-dev

mdavis36 commented 1 year ago

You need to re-run tpl-manager all of our TPLs relating to python have changed with the Python3 update.