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LPDI-EPFL / masif

MaSIF- Molecular surface interaction fingerprints. Geometric deep learning to decipher patterns in molecular surfaces.
Apache License 2.0
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embedding extraction #74

Open johnnytam100 opened 6 months ago

johnnytam100 commented 6 months ago

Hi masif authors! I want to extract protein-level embeddings using masif. May I know if it is possible? Would appreciate if an example could be illustrated. Thanks!

Lsz-20 commented 5 months ago

same question

Chenjw99 commented 4 months ago

+1

WHUminghui commented 4 weeks ago

Hi masif authors! I want to extract protein-level embeddings using masif. May I know if it is possible? Would appreciate if an example could be illustrated. Thanks!

you could use ESM2

johnnytam100 commented 4 weeks ago

Umm.. but masif is not esm2?