Closed drewoldag closed 1 month ago
I believe that I would advocate for the fix where we update the various locations that are hard coded to look for .../data/SIMGEN_PUBLIC_DES
and replace those with the dynamically generated <user_cache>/resspect/SIMGEN_PUBLIC_DES
.
And if that programmatically defined directory is not found, then prompt the user to run fetch_example_data
.
It seems like most of the places where we're looking for the hardcoded directory is in the documentation actually. There is one place in build_cannondical_snpcc.py
that defines data_dir = '~/data/...'
, so we would need to update that as well.
To reproduce:
pip install resspect
fetch_example_data