statistics=FALSE)
Error in (function (cond) :
error in evaluating the argument 'x' in selecting a method for function 'colnames': subscript out of bounds.
Hi! I'm trying to run aggregateAcrossCells but keep getting the above error. My colnames is the cell barcode and SampleID column in my colData specifies which sample each cell comes from. I have checked that colnames and SampleID have the same length. I want to aggregate the cells based on the sample.
Can you provide a minimum reproducible example with the most recent release version of scuttle (1.12.0) , e.g., based on the example in ?aggregateAcrossCells?
sce.sum <- aggregateAcrossCells(top,
Hi! I'm trying to run aggregateAcrossCells but keep getting the above error. My colnames is the cell barcode and SampleID column in my colData specifies which sample each cell comes from. I have checked that colnames and SampleID have the same length. I want to aggregate the cells based on the sample.
Thank you for your help!