search

LTLA / scuttle

Clone of the Bioconductor repository for the scuttle package.
https://bioconductor.org/packages/devel/bioc/html/scuttle.html
9 stars 7 forks source link

Typing out the three QC commands is a pain #6

Closed LTLA closed 3 years ago

LTLA commented 3 years ago

Need to abbreviate this into a single function call:

stats <- perCellQCMetrics(X)
keep <- quickPerCellQC(stats)
X <- X[,!keep$discard]

Probably rename quickPerCellQC() to filterQCMetrics() and use quickPerCellQC() as the wrapper to do the above.

LTLA commented 3 years ago

Done in 8bf3d96c85f9d35d5b916b30313bae3f102e375a.