search

Layne-Huang / PMDM

MIT License
109 stars 23 forks source link

How to generate .lmdb and .pt file before training? #24

Closed Yuhan-Fei closed 5 months ago

Yuhan-Fei commented 5 months ago

Hi Huang, Thank you for the great work. When I reproduce your project with the code below: "python -u train.py --config ./configs/crossdock_epoch.yml"

It gives me the following error: “lmdb.Error: ./data/crossdocked_pocket10/crossdocked_pocket10_processed.lmdb: No such file or directory”, and I also noticed that I cannot find _name2id.pt file.

I would be appreivate if you could provide the scripts that how to generate .lmdb and .pt files for both corssdocked dataset and pdbind dataset.

Best

Yuhan-Fei commented 5 months ago

Just need to move the data folder from ~/PMDM/configs/ to ~/PMDM/