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LebeerLab
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tidytacos
Functions to manipulate and visualize microbial community data
https://lebeerlab.github.io/tidytacos/
GNU General Public License v3.0
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Add unifrac distance metric
#24
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TheOafidian
closed
2 months ago
TheOafidian
commented
6 months ago
Add a way to calculate unifrac distances
[x] Determine a tree of the asvs using phangorn, eg:
https://cran.r-project.org/web/packages/phangorn/vignettes/Trees.html
[x] Get Unifrac distance using said phylo tree
https://www.rdocumentation.org/packages/phyloseq/versions/1.16.2/topics/UniFrac
Add a way to calculate unifrac distances