Update R code and conda install

LeeBergstrand / BackBLAST_Reciprocal_BLAST

This repository contains a reciprocal BLAST program for filtering down BLAST results to best bidirectional hits. It also contains a toolkit for finding and visualizing BLAST hits for gene clusters within multiple bacterial genomes.

MIT License

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Update R code and conda install #53

Closed jmtsuji closed 4 years ago

jmtsuji commented 4 years ago

Updated dependency versions in conda_requirements.yaml (some R code had deprecated)
Minor touch-ups to R code
Added midpoint rooting for phylogenetic trees
Added the option to write the final plotting table to file

Passes the end-to-end test.