venus-sherathiya
commented
7 months ago Sorry for the late response, I was on a vacation. I am not sure what are you doing wrong. can we please meet on a zoom call ? Please send me your availability at venus.sherathiya@northwestern.edu.
Hi, I'm using Guppy with csv. files and I could run individual and group analyses and also visualize them on GUI. However, with my new files I needed to remove some artifacts (as shown on fig 1).
I followed all the steps in the tutorial (and also from the video tutorial), but I could never visualize the data on GUI. I tried a lot of different combinations (changing parameters, order of the steps, folders, and different datasets, etc) but none of it worked. I was re-watching the video tutorial an I noted something that was there compared to the information that I was seeing on my terminal windows. As shown in fig 2, when I draw the lines to select the data without the artifact I have the X coordinate showed there, but my Y coordinate is always 0 there (on the tutorial video there was a specific number for the Y coordinate). I'm not sure if this is the problem, but it's something different that I noted.
But besides it I could save the coordinates and also generate the updated data without the artifact.
I could also move forward and run the PSTH compilation step and generate the figure (as in the figure bellow).
But I noted also an error message there regarding TTLs visualization (but the zscore graph after the PSHT is still generated). Its weird because if I run this file without the artifact removal for individual analyses this error message don't appear on the terminal and I can open the data on GUI.
Then when I move to the final step of the analysis to see the data on GUI, there is this other error message:
Do you have some idea what could be the problem that is not allowing me to visualize the data on GUI after the artifact removal?