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LiQian-XC / sctour

A deep learning architecture for robust inference and accurate prediction of cellular dynamics
https://sctour.readthedocs.io
MIT License
51 stars 4 forks source link

Availability of demo dataset #1

Closed wu-yc closed 2 years ago

wu-yc commented 2 years ago

Hi Qian,

Thanks a lot for this fantastic package. This is really a great tool.

In the tutorial of scTour’s cross-data predictions and Using scTour to infer cellular dynamics, the demo data can not be found: 

'../../../mouse_endo_brain/raw_count_matrix_brain.txt'
'../../../mouse_endo_brain/Metadata.csv'
'../../../../EX_development_data/EX_development_human_cortex_10X.h5ad'
'../../../../EX_development_data/EX_development_human_cortex_DropSeq.h5ad'
'../../../../EX_development_data/EX_development_human_organoids_10X.h5ad'
'../../../../EX_development_data/EX_development_mouse_cortex_10X.h5ad'

Would you kindly upload them?

Cheers, Yingcheng

LiQian-XC commented 2 years ago

@wu-yc, since the datasets are kind of large, I will try to upload them soon. Sorry for the inconvenience this has caused.

Best, Qian

LiQian-XC commented 2 years ago

@wu-yc the download link for all the data have been added in the corresponding notebooks. Please let me know if you cannot download them.

wu-yc commented 2 years ago

@LiQian-XC Thanks so much for the kind help