Vignette plans

[lcolladotor]

• [ ] Have a quick start vignette showing some content similar to https://bioconductor.org/packages/release/bioc/vignettes/recount/inst/doc/recount-quickstart.html#2_Quick_start_to_using_to_recount https://rna.recount.bio/docs/quick-access.html#quick-recount3 https://bioconductor.org/packages/3.17/bioc/vignettes/recount3/inst/doc/recount3-quickstart.html#3_Quick_start.
• [ ] Add a third vignette comparing https://research.libd.org/DeconvoBuddies/reference/plot_gene_express.html vs plots from scater since we know that a lot of people mostly use this function
• [ ] Complete vignette showing how to run BisqueRNA (since it's on CRAN) using our bulk RNA-seq data from #4 as part of the full example vignette. This vignette could include vs the RNAScope/IF proportions showing how to make parts of Fig 4A and Fig4B. Also show the hockey-stick plot comparing Mean Ratio vs 1vAll.

[lahuuki]

meant to close #2