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LieberInstitute / HumanPilot

Spatial Transcriptomics human DLPFC pilot study part of the spatialLIBD project
https://doi.org/10.1038/s41593-020-00787-0
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naming of columns 5 and 6 #3

Closed abspangler13 closed 3 years ago

abspangler13 commented 3 years ago

https://github.com/LieberInstitute/HumanPilot/blob/7e0f25188969913bc247b5d6c1c47c3ad94c6f15/Analysis/Layer_Notebook.R#L116

In Lukas' code he refers to column 5 of that table as the columns and column 6 as the rows whereas your code does the reverse.

We need to decide which is correct.

abspangler13 commented 3 years ago

We reversed the columns in Lukas' code to match those from HumanPilot (Leo's code).