Finish core files setup - Githubissues

LieberInstitute / TREG

Tools for finding Total RNA Expression Genes in single nucleus RNA-seq data

http://research.libd.org/TREG/

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Finish core files setup #2

Closed lcolladotor closed 2 years ago

lcolladotor commented 2 years ago

Consider adding more flags like we have in biocthis (see the top of the README) https://github.com/lcolladotor/biocthis

You can do that with https://github.com/LieberInstitute/TREG/blob/main/dev/03_core_files.R#L57-L59 + other lines like https://github.com/LieberInstitute/TREG/blob/main/dev/03_core_files.R#L67.

I guess in general, you might be missing steps from 03_core_files.R. Like https://github.com/LieberInstitute/TREG/blob/main/dev/03_core_files.R#L55 which is what #1 is about.