Update pre and post harmony UMAP plots

LieberInstitute / Visium_SPG_AD

Visium SPG AD project (n = 10) using Visium Spatial Proteogenomics (Visium-SPG) on dissections from the inferior temporal cortex (ITC) from Alzheimer's disease cases and controls.

https://research.libd.org/Visium_SPG_AD

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Update pre and post harmony UMAP plots #43

Closed lcolladotor closed 1 year ago

lcolladotor commented 2 years ago

Kristen told us that Abby @abspangler13 has some new code for this at spatialDLPFC. Abby, can you point us to it? Thanks!

lcolladotor commented 2 years ago

From Abby on Slack: https://github.com/LieberInstitute/spatialDLPFC/blob/main/code/analysis/01_build_spe/sfigu_harmony.R

shkwon17 commented 1 year ago

Done.