Create shiny app documentation files

LieberInstitute / Visium_SPG_AD

Visium SPG AD project (n = 10) using Visium Spatial Proteogenomics (Visium-SPG) on dissections from the inferior temporal cortex (ITC) from Alzheimer's disease cases and controls.

https://research.libd.org/Visium_SPG_AD

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Create shiny app documentation files #51

Closed lcolladotor closed 1 year ago

lcolladotor commented 2 years ago

Similar to https://github.com/LieberInstitute/spatialDLPFC/issues/75. You could ask Abby for a DSgs if you need some help Sang Ho.

lcolladotor commented 1 year ago

See https://jhu-genomics.slack.com/archives/C01GJ0F731Q/p1671205670824189 and related messages

shkwon17 commented 1 year ago

this is the overview google doc: https://docs.google.com/document/d/11uuWmjq1JnqXr-x0hskk_9GDyOGfg0NDrkNFjX054kY/edit
this is the spot/layer-level google doc: https://docs.google.com/document/d/1r9vSgAVG99sSPc8fGB8vsBoUVo_8_dG6eOduw8ZGtCw/edit#
images: they are download-able from this slack message: https://jhu-genomics.slack.com/archives/C01GJ0F731Q/p1679331746040319

spatialLIBD_static_cluster_path_groups_V10A27106_D1_Br3880_2022-09-27_21_41_38 VIFAD_Fig1_300dpi (1)

shkwon17 commented 1 year ago

The URL of the webpage that contains the video: https://www.10xgenomics.com/products/spatial-proteogenomics.

The video itself doesn't have a direct URL.

[ ] Should we reach out to 10x to ask about URL?

shkwon17 commented 1 year ago

[x] https://github.com/LieberInstitute/Visium_SPG_AD/issues/79

shkwon17 commented 1 year ago

[ ] Add in the introduction to Samui to the google doc (Sang Ho)