Closed lcolladotor closed 1 year ago
We first need to adapt the R objects Lionel pointed us to from https://jhu-genomics.slack.com/archives/C01KSLPCGAC/p1676930197844079?thread_ts=1676658039.267219&cid=C01KSLPCGAC into a modeling_results structure. See the output from the examples at http://research.libd.org/spatialLIBD/reference/registration_wrapper.html.
modeling_results
We don't need everything, just some of the pieces http://research.libd.org/spatialLIBD/reference/gene_set_enrichment.html requires like at https://github.com/LieberInstitute/spatialLIBD/blob/48bd1dd2ee84166fd6cc3a2d8944a3be834d3f2b/R/gene_set_enrichment.R#L73-L76
We first need to adapt the R objects Lionel pointed us to from https://jhu-genomics.slack.com/archives/C01KSLPCGAC/p1676930197844079?thread_ts=1676658039.267219&cid=C01KSLPCGAC into a
modeling_resultsstructure. See the output from the examples at http://research.libd.org/spatialLIBD/reference/registration_wrapper.html.We don't need everything, just some of the pieces http://research.libd.org/spatialLIBD/reference/gene_set_enrichment.html requires like at https://github.com/LieberInstitute/spatialLIBD/blob/48bd1dd2ee84166fd6cc3a2d8944a3be834d3f2b/R/gene_set_enrichment.R#L73-L76