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spatialDLPFC
spatialDLPFC project involving Visium (n = 30), Visium SPG (n = 4) and snRNA-seq (n = 19) samples
http://research.libd.org/spatialDLPFC/
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To add integrated analysis of Tangram results with datadriven spatial domain
#134
Closed
boyiguo1
closed
1 year ago
boyiguo1
commented
1 year ago
Include an exploratory analysis that is motivated by #131
Exploratory analysis via visualization, examining
The difference between cell count estimation from VistoSeg and Tangram
The cell type composition (K=13, layer-specific) of each individual sample
Sample-specific cell composition stratified by spatial domain