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LightForm-group / UoM-CSF-matflow

Matflow configuration files and task schemas for running on the University of Manchester's CSF
MIT License
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Workflow hangs on simulate_volume_element_loading task on CSF when ctf used as input #10

Open alecdavis1986 opened 3 years ago

alecdavis1986 commented 3 years ago

Describe the problem When using ctf as input orientations, workflow submits ok on CSF, but never completes simulate_volume_element_loading task. When using the same workflow but with random orientations as an input, workflow completes just fine.

Expected behavior Workflow should complete in approximately the same time as when using random orientations.

Output from matflow validate Loading matflow config from /mnt/iusers01/jf01/mclikad2/.matflow/config.yml Loading task schemas from 2 file(s)...OK! Loading software definitions from 2 file(s)...OK! Loading extensions... "neper"...(software: "neper") from matflow_neper (version 0.1.3) "mtex"...(software: "mtex") from matflow_mtex (version 0.1.6) "formable"...(software: "formable") from matflow_formable (version 0.1.7) "demo"...(software: "dummy_software") from matflow_demo_extension (version 0.1.2) "defdap"...(software: "defdap") from matflow_defdap (version 0.1.4) "damask"...(software: "damask") from matflow_damask (version 0.1.15) Validating task schemas against loaded extensions...OK! 36/38 schemas are valid. The following schemas are invalid: ('visualise_volume_element_response', 'VTK', 'damask'): No input map function found for input map that generates file "geom.geom". ('simulate_deformation', 'FE', 'abaqus'): No input map function found for input map that generates file "inputs.inp".

Workflow directory and/or profile location Please copy the whole workflow directory (that created by matflow go ...) into a shareable location on the CSF or Dropbox. Share a link or CSF path to that location here.

/mnt/eps01-rds/Fonseca-Lightform/shared/matflow-debugging/Alec/

If the profile YAML file does not run, please just share the profile file.

MatFlow and extension package versions If your problem is on the CSF, please paste below the output from the following commands on the CSF:

module load apps/anaconda3/5.2.0/bin
pip list --user | grep "matflow\|damask\|formable"

No output given from CSF after running commands...

If your problem is on your local computer, please paste below the output from the following command on your local computer:

aplowman commented 3 years ago

This is a problem with DAMASK. Let's keep the issue open for now.