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LihuaJulieZhu / CRISPRseek

Design of target-specific guide RNAs in CRISPR-Cas9, genome-editing systems
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Question about output names of gRNAs #1

Closed FabianDK closed 2 years ago

FabianDK commented 3 years ago

Hello,

I was wondering if you could give some details on the output gRNA naming. I first thought the number in the name, e.g. 'gR47F', corresponds to the start position of the gRNA in the query sequence, but that is not the case. It more looks like it is the place of the predicted cut-site.

Thanks!

LihuaJulieZhu commented 2 years ago

Hi Daniel,

I am very sorry for having missed your comments!

Yes, you were right about the output gRNA naming convention. It is the place of the predicted cut-site.

For your future reference, it would be great to post your questions at https://support.bioconductor.org.

Thanks!

Best regards, Julie