LincolnSteinLab / gdc-viewer

A JBrowse plugin for viewing GDC Data
https://lincolnsteinlab.github.io/gdc-viewer/
MIT License
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Masked Somatic Mutation Track #64

Open agduncan94 opened 3 years ago

agduncan94 commented 3 years ago

Overview Data Format - MAF Data Category - Simple Nucleotide Variation Data Type - Masked Somatic Mutation Example File ID - 27f42413-6d8f-401f-9d07-d019def8939e

Notes Add a SeqFeature for Masked Somatic Mutation Track. This is a MAF. This is an aggregated version of a VCF file, so investigate if they are actually the same format. It may be that we can reuse the store classes for VCF files.

Investigate the best way to display tracks (XYPlot vs HTMLFeature).

agduncan94 commented 3 years ago

Related to https://github.com/agduncan94/gdc-viewer/issues/81