LincolnSteinLab / gdc-viewer

A JBrowse plugin for viewing GDC Data
https://lincolnsteinlab.github.io/gdc-viewer/
MIT License
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Extend the by file id/name UI to support all of our open access files #92

Open agduncan94 opened 4 years ago

agduncan94 commented 4 years ago

Currently, our UI for adding file by id/name only works with BAM files. We need to extend it so that it is generic, and supports more file types. First, we will do this for the open-access file types we created.

A combination of data category, data type, and data format can be used to determine which store class and track type to use when adding other file types.

We should also use this information to tell the user whether or not we are able to add the file they have searched for as a track.