I cannot get right brain heatmap using brain-heatmap-web so I turn to the code.
I am new to Matlab and python code. I tried the code from your project using Matlab 2021a with python3.7, some errors show up. I tried to fix some updated syntax like replace print with print( ), but I cannot solve other problems more complex than this one.
I am familiar with R and trying to plot gene expression data to different mouse brain regions. Do you think is easier to make a brain region map like a geography map? so we can easily assign the expression data to different regions and show the different values by colors. After a search online, my guess is the shapefile is a choice to do this.
hi LiorKirsch,
I cannot get right brain heatmap using brain-heatmap-web so I turn to the code.
I am new to Matlab and python code. I tried the code from your project using Matlab 2021a with python3.7, some errors show up. I tried to fix some updated syntax like replace print with print( ), but I cannot solve other problems more complex than this one.
I am familiar with R and trying to plot gene expression data to different mouse brain regions. Do you think is easier to make a brain region map like a geography map? so we can easily assign the expression data to different regions and show the different values by colors. After a search online, my guess is the shapefile is a choice to do this.
Shuai