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DMR Identification Tool
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NameError: name 'status' is not defined #37

Open malonzm1 opened 1 year ago

malonzm1 commented 1 year ago

Hi,

I'm trying to run HOME, HOME-pairwise -t CG -i ./neg_files.txt -o ./results/neg_2, however I encounter the error below:

Traceback (most recent call last): File "/scratch/work/malonzm1/.conda_envs/HOME/bin/HOME-pairwise", line 4, in import('pkg_resources').run_script('HOME==1.0.0', 'HOME-pairwise') File "/scratch/work/malonzm1/.conda_envs/HOME/lib/python2.7/site-packages/pkg_resources/init.py", line 666, in run_script self.require(requires)[0].run_script(script_name, ns) File "/scratch/work/malonzm1/.conda_envs/HOME/lib/python2.7/site-packages/pkg_resources/init.py", line 1469, in run_script exec(script_code, namespace, namespace) File "/scratch/work/malonzm1/.conda_envs/HOME/lib/python2.7/site-packages/HOME-1.0.0-py2.7.egg/EGG-INFO/scripts/HOME-pairwise", line 492, in

NameError: name 'status' is not defined

Pls. advise. Thanks!

Akanksha2511 commented 1 year ago

Hi,

Could you please provide the full path of the input and output file instead of relative path in the command above and run it again.

Thanks, Akanksha

malonzm1 commented 1 year ago

Hi,

Thanks. I provided the full path to the input and output files but it still gives the same error.