LittleBrainLab / microbrain

Fully automated whole-brain diffusion MRI analysis of grey matter
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Add registration of atlases to cortex mid-thickness mesh #10

Open grahamlittlephd opened 1 year ago

grahamlittlephd commented 1 year ago

Need a method to segment the cortex,

Candidate method: register brainnetome atlas to native imaging space using already computed ANTS transformation nearest neighbors interpolation of labels to mid-thickness surface. clean labels such that only one label exists per region on the surface.

Alternate method: Use spherical registration to get regions registered properly on the cortex