This was caused by the VTK writer not taking into account the pixel dimension[0] when it equaled -1. This appeared when microbrain encountered diffusion imaging data that was reoriented to LPS rather than RAS that is standard on Siemens.
Also added a script to output a voxelbased white matter mask for tracking. Will be useful in future tractography updates.
Fixed the flipping of output voxel masks.
This was caused by the VTK writer not taking into account the pixel dimension[0] when it equaled -1. This appeared when microbrain encountered diffusion imaging data that was reoriented to LPS rather than RAS that is standard on Siemens.
Also added a script to output a voxelbased white matter mask for tracking. Will be useful in future tractography updates.