LiuzLab / AI_MARRVEL

AI-MARRVEL (AIM) is an AI system for rare genetic disorder diagnosis
GNU General Public License v3.0
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Simplify Installation: Add downloading bcftools/bedtools to Dockerfile #25

Closed arine closed 1 week ago

arine commented 3 months ago

Is your feature request related to a problem? Please describe. Download and install the required file/software when building the Docker image. The documentation requires users to run these commands:

# Download necessary software
#   bcftools
wget https://github.com/samtools/bcftools/releases/download/1.9/bcftools-1.9.tar.bz2
#   bedtools
wget https://github.com/arq5x/bedtools2/releases/download/v2.30.0/bedtools.static.binary
mv bedtools.static.binary run/bedtools
chmod a+x run/bedtools

that can be in the Dockerfile

Describe the solution you'd like Add above to Dockerfile

Describe alternatives you've considered

Additional context