LiuzLab / AI_MARRVEL

AI-MARRVEL (AIM) is an AI system for rare genetic disorder diagnosis
GNU General Public License v3.0
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Fixed imputation error from a wrong commit #40

Closed ChaozhongLiu closed 2 months ago

ChaozhongLiu commented 2 months ago

In a previous commit of Chaozhong, imputation method has been wrongly replaced with a future dev version.

The imputation method used in our current trained model:

Indel: Impute with mean or median
SNP: Impute with least pathogenic value (except for allele frequency)

The wrongly committed imputation method:

Indel: Impute with mean or median
SNP: Impute with mean or median

This PR is to reverse it back so our current model prediction is not affected.