Hi, thanks for making the systemsseRology package available!
I noticed a comment in the code for systemsseRology::visualize_ropls_scores() which very briefly says
# confidence levels for ellipses
The ellipse drawing function that is called is ggplot2::stat_ellipse() (documentation here).
I think the comment could be a little misleading because the ellipses being drawn are data ellipses, not confidence ellipses, so you may want to change the text to something like:
# The level at which to draw the ellipse for the data ellipse
I had a brief exchange with your colleague, Deniz Cizmeci, to make sure this detail is correct.
Thanks for your attention to this minor point. For one of our recent studies, this was a question that came up during manuscript preparation, so I wanted to bring it to your attention.
Hi, thanks for making the systemsseRology package available!
I noticed a comment in the code for
systemsseRology::visualize_ropls_scores()which very briefly saysThe ellipse drawing function that is called is
ggplot2::stat_ellipse()(documentation here).I think the comment could be a little misleading because the ellipses being drawn are data ellipses, not confidence ellipses, so you may want to change the text to something like:
I had a brief exchange with your colleague, Deniz Cizmeci, to make sure this detail is correct. Thanks for your attention to this minor point. For one of our recent studies, this was a question that came up during manuscript preparation, so I wanted to bring it to your attention.