Hello，
I'm looking forward to running readfish on some samples,So I tested the fast5 file provided. According to the description in the readme.md file, an attempt was made to add [custom_settings] and 'silumination='my/path/to/fast5' to the accompanying toml file in the repo, but an error occurred:
😾 This TOML file has failed validation See below for details:
Additional properties are not allowed ('custom_settings' was unexpected)
Then I modified the 'ru/static/readfish_toml. schema. json' file, but I couldn't customize the format of the toml file, and the above error still occurred.
So I have some questions,
How to solve this problem？
Can readfish use fast5 files for testing without connecting to Minknow devices?
Do I have to use the sever version of Guppy to apply to readfish? Can Guppy installed locally be supported?
alexomics
commented
1 year ago
Hello， I'm looking forward to running readfish on some samples,So I tested the fast5 file provided. According to the description in the readme.md file, an attempt was made to add [custom_settings] and 'silumination='my/path/to/fast5' to the accompanying toml file in the repo, but an error occurred:
Then I modified the 'ru/static/readfish_toml. schema. json' file, but I couldn't customize the format of the toml file, and the above error still occurred.
So I have some questions,
Have a good day. Looking forward to your reply.