LooseLab / readfish

CLI tool for flexible and fast adaptive sampling on ONT sequencers
https://looselab.github.io/readfish/
GNU General Public License v3.0
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Resolve barcode region issue. #297

Closed mattloose closed 9 months ago

mattloose commented 9 months ago

As identified in #289 we inadvertently created a requirement for a region on the statistics class. A partial workaround is suggested in the associated branch but this is just a temporary workaround in that statistics still expects a region where it should use a barcode instead.

### Tasks
- [x] Remove absolute requirement for a region in statistics and instead use barcode where barcode is in use.
- [x] confirm barcode tomls do not require a region
- [x] double check example tomls for region/barcode conflicts.
mattloose commented 9 months ago

Closed in #299