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LorenFrankLab / spyglass

Neuroscience data analysis framework for reproducible research built by Loren Frank Lab at UCSF
https://lorenfranklab.github.io/spyglass/
MIT License
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Allow import of times and labels from previous spike sorting #9

Closed lfrank closed 11 months ago

lfrank commented 4 years ago

For older data we need to be able to import a curated spike sorting (cluster label, unit times, curation label, sort interval).

This should probably be done by creating a sorting object using SpikeInterface and importing that object and the labels using the curated firings.mda from mountainview.

khl02007 commented 11 months ago

@edeno @lfrank It's probably better to convert the old sortings (in e.g. MDA format) into NWB files and then ingest them into the database. In theory we can make a function that adds an entry to e.g. SpikeSortingOutput directly but then we would be missing many other information required for analysis. I suggest closing this issue.