How to annotate pA length

LuChenLab / SCAPE

Single Cell Alternative Polyadenylation using Expectation-maximization

MIT License

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How to annotate pA length #19

Open ZehangJiang opened 2 weeks ago

ZehangJiang commented 2 weeks ago

171634 Hi, I noticed that the output collapse_pa.tsv.gz contains pA site and strand info except pA length. How can we get this info in the downstream analysis of SCAPE or else where? Thanks!

zhou-ran commented 1 week ago

Hi,

I hope this wiki page (https://github.com/LuChenLab/SCAPE/wiki) will be helpful.

Best regards, Ran