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LurLab-UCI / MiniAnalysis

Matlab software for measuring frequency and amplitude of miniature events in patch clamp electrophysiology
GNU General Public License v3.0
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Ask for help #2

Open jiangjinxiang opened 2 years ago

jiangjinxiang commented 2 years ago

Dear Sir/Madam,

I want to ask you how to import or transfer "*.abf" files into your toolbox for analysis?

Thanks!

LurLab-UCI commented 2 years ago

Hi,

You will have to change the file loading script a little. Currently it calls on loadfile_hd5_total.m to load a data file generated in wavesurfer (by Janelia Reserach Campus). To load your .abf file you might want to use something like this: https://www.mathworks.com/matlabcentral/fileexchange/6190-abfload You will need to replace loadfile_hd5_total with the abfload function and probably do some setting up to get the right datastream from your file.

I hope this helps.

jiangjinxiang commented 2 years ago

Hi,

You will have to change the file loading script a little. Currently it calls on loadfile_hd5_total.m to load a data file generated in wavesurfer (by Janelia Reserach Campus). To load your .abf file you might want to use something like this: https://www.mathworks.com/matlabcentral/fileexchange/6190-abfload You will need to replace loadfile_hd5_total with the abfload function and probably do some setting up to get the right datastream from your file.

I hope this helps.

Thanks for your kindly help!