Update FLAMES to python3 for reproducible outputs

LuyiTian / FLAMES

Full-length transcriptome splicing and mutation analysis

GNU General Public License v3.0

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Closed ChangqingW closed 2 years ago

ChangqingW commented 2 years ago

Update to python3; deterministic tie breaking for consistent outputs across different platforms and with R/Bioconductor FLAMES

ChangqingW commented 2 years ago

Tested with the Mouse muscle stem cell dataset, but I thought I should let you know before merging. @LuyiTian

diff <(zcat flames_py_out/transcript_count.csv.gz |sort ) <(zcat flames_r_out/transcript_count.csv.gz | sort) | wc
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