Source compilation errror

LuyiTian / FLAMES

Full-length transcriptome splicing and mutation analysis

GNU General Public License v3.0

73 stars 11 forks source link

Source compilation errror #33

Closed lingminhao closed 1 year ago

lingminhao commented 1 year ago

Hi @LuyiTian , I am currently using FLAMES for single cell isoform identification and detection. Now I'm at the barcode assignment steps, where I ran the compilation code g++ -std=c++11 -lz -O2 -o match_cell_barcode ssw/ssw_cpp.cpp ssw/ssw.c match_cell_barcode.cpp kseq.h edit_dist.cpp as shown in the README, but I get the following error:

What is the problem?

sonalhenson commented 9 months ago

@lingminhao , did you resolve this error? Asking as I'm facing the same error and would welcome suggestions on how to fix it. Thanks