Thank you for development of nice tool.
I'm applying BLAZE and FLAMSE to my single cell ONT data.
I've gotten useful output, but I need a genomic coordinate for each transcript to compare the transcript structure.
However, some of transcripts in the "transcript_count.csv.gz" are not existed in the "isoform_annotated.gff3" and "isoform_annotated.filtered.gff3". How can I find the information for these transcripts?
Hi,
Thank you for development of nice tool. I'm applying BLAZE and FLAMSE to my single cell ONT data. I've gotten useful output, but I need a genomic coordinate for each transcript to compare the transcript structure. However, some of transcripts in the "transcript_count.csv.gz" are not existed in the "isoform_annotated.gff3" and "isoform_annotated.filtered.gff3". How can I find the information for these transcripts?
Thank you!