search

MD-Anderson-Bioinformatics / NG-CHM_Galaxy

Next-Generation Clustered Heat Maps for Galaxy
0 stars 1 forks source link

Galaxy builds map with columns in original order, but viewer fails to display it. #9

Open jmelott opened 3 years ago

jmelott commented 3 years ago

Originally Pivotal Tracker issue: https://www.pivotaltracker.com/story/show/170111645 bug entered by James M. Melott on 12/04/2019

Used attached file as matrix. Worked fine when I had both rows and columns at default Ward/Euclidean. When switched columns to Original Order, Galaxy processed it fine, but when tried to view it, left at loading message with following error in console.

VM1428:1 Uncaught SyntaxError: Unexpected token M in JSON at position 1374090 at JSON.parse () at VM1028 ngchmWidget-min.js:146 at VM1028 ngchmWidget-min.js:41 at FileReader.e.onload (VM1028 ngchmWidget-min.js:32)

jmelott commented 3 years ago

File used for test: intensity_distributions.txt

jmelott commented 3 years ago

@markstucky - Dec 19 2019, 5:53 pm This dataset has 23000 rows in it. It also has unusual column headers. I'm not sure which one was the reason for the problem but we don't support 23000 rows at this time so I'm iceboxing the ticket.