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MDAnalysis / UserGuide

User Guide for MDAnalysis
https://userguide.mdanalysis.org
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Update supported TPR versions #191

Open lilyminium opened 2 years ago

lilyminium commented 2 years ago

This table is out of date:

https://userguide.mdanalysis.org/stable/formats/reference/tpr.html#supported-versions

A fix should: check the MDAnalysis class for currently supported versions, and update the table

robotjellyzone commented 2 years ago

@lilyminium can you please tell me where can i see the versions? actually, the table doesn't list the class names & columns of this table seems to be confusing can you please clarify?

lilyminium commented 2 years ago

@robotjellyzone the class name is MDAnalysis.topology.TPRParser, which was in the caption. There is a page on this parser in the normal documentation: https://docs.mdanalysis.org/stable/documentation_pages/topology/TPRParser.html . TPR is a format that's mostly used by the Gromacs software, which continuously updates the TPR format. Therefore MDAnalysis has to keep updating its reader to keep up.

robotjellyzone commented 2 years ago

@robotjellyzone the class name is MDAnalysis.topology.TPRParser, which was in the caption. There is a page on this parser in the normal documentation: https://docs.mdanalysis.org/stable/documentation_pages/topology/TPRParser.html . TPR is a format that's mostly used by the Gromacs software, which continuously updates the TPR format. Therefore MDAnalysis has to keep updating its reader to keep up.

so @lilyminium you mean, this TPRParser.py file creates this table and sets the versions for it? or can you please be more specific? actually i've checked this class specifically the parse module but didnt get how this table is getting the version