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MDAnalysis / panedr

Reads Gromacs EDR file to populate a pandas dataframe
GNU Lesser General Public License v2.1
31 stars 7 forks source link

xdrlib is deprecated as of py3.11 #49

Closed IAlibay closed 1 year ago

IAlibay commented 2 years ago

See https://peps.python.org/pep-0594/#xdrlib will be removed in py3.13

orbeckst commented 2 years ago

Are we just going to vendor it?

With GROMACS we will need xdrlib for eternity.

IAlibay commented 2 years ago

Makes sense to do so, code isn't too complicated: https://github.com/python/cpython/blob/3.10/Lib/xdrlib.py

But we'd have to make sure it's all good license wise (should be).

orbeckst commented 2 years ago

Is mda-xdrlib available now or is it waiting for https://github.com/MDAnalysis/mda-xdrlib/issues/2 ?

IAlibay commented 2 years ago

@orbeckst sorry that's waiting on a standalone action I'm trying to put together that will hopefully just deal with CD for everything (I'm currently trying to work out how to be a little bit more flexible so it can cover all the packages under the MDA umbrella that require pure python builds).