Add IO and computation time per block in timing

MDAnalysis / pmda

Parallel algorithms for MDAnalysis

https://www.mdanalysis.org/pmda/

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Add IO and computation time per block in timing #86

Closed VOD555 closed 5 years ago

VOD555 commented 5 years ago

Expected behaviour

I/O and computation time per block should be stored in the timing object so that one can easily know the components of the total time used for each block.

Actual behaviour

There are only I/o and computation time per frame saved in timing object.

Currently version of MDAnalysis:

MDAnalysis 0.19.2 PMDA 0.2.1 dask 1.2.2

orbeckst commented 5 years ago

How about just storing the information for how to slice the per-frame times into blocks?