--printseq should NOT write to folder in current directory

MDU-PHL / meningotype

In silico serotyping, finetyping and Bexsero antigen sequence typing of Neisseria meningitidis

GNU General Public License v3.0

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Closed tseemann closed 7 years ago

tseemann commented 7 years ago

I notice --printseq creates a folder in current dir and puts >1 fasta file in it.

This should be specified by the user. eg. --saveseq <folder> instead.