Example Excel file upload does not work

MHH-RCUG / scrnaseq_app

UNDER DEVELOPMENT: Shiny app for visualisation of scRNASeq data

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Example Excel file upload does not work #31

Closed dimialex closed 3 years ago

dimialex commented 4 years ago

Dear all, I just tried to upload the example Excel file provided by you and it seems that the upload did not work. I cannot select any genes and no plots are being created, throwing such warnings

Warning: Error in UseMethod: no applicable method for 'DefaultAssay' applied to an object of class "NULL"
  [No stack trace available]

I have cleaned up workspace, restarted R, tried the app also in the browser and the result is the same, no genes uploaded. Best, Dimitra

mariusrueve commented 4 years ago

I tried to recreate this problem, but the excel files works for me. I'll try to figure out the cause of this error and fix it.

colindaven commented 4 years ago

[ ] Colin - check upload works from most recent singularity code and container

dimialex commented 3 years ago

Tried it again and it works, I'm closing this, thanks