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MI2DataLab
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crs19-monitor
Monitor of SARS-CoV-2 variants and mutations
https://monitor.mi2.ai/
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fix typos
#87
hbaniecki
closed
2 years ago
0
Unify aliased / dealiasted pango in database
#86
piotrpiatyszek
opened
3 years ago
0
Refactor charts to use categories and who names
#85
piotrpiatyszek
closed
3 years ago
0
Script for monitoring changes of classification
#84
piotrpiatyszek
opened
3 years ago
0
Broader documentation
#83
michalkowalski94
closed
3 years ago
2
Refactor site generator and add cleaned database
#82
piotrpiatyszek
closed
3 years ago
0
Change names of variants in the monitor according to this nomenclature: https://www.who.int/en/activities/tracking-SARS-CoV-2-variants/
#81
pbiecek
closed
3 years ago
0
fasta to gisaid - week 8
#80
pbiecek
closed
3 years ago
1
New look/design for https://monitor.mi2.ai/ consistent with the covar monitor.
#79
pbiecek
opened
3 years ago
0
Autorisation is needed in order to see #77. Make it simple - htaccess
#78
pbiecek
closed
3 years ago
0
Detailed information about IDs for a given variant in a given station
#77
pbiecek
closed
3 years ago
0
Create cleaned database with parsed values
#76
piotrpiatyszek
closed
3 years ago
0
Assign ISO_3166-2 to unique continent/country from GISAID
#75
piotrpiatyszek
closed
3 years ago
0
World monitor
#74
piotrpiatyszek
closed
3 years ago
0
twitter
#73
pbiecek
opened
3 years ago
0
optimize performance
#72
hbaniecki
closed
3 years ago
1
[r] monitor enhancements
#71
hbaniecki
closed
3 years ago
0
fix too large facets with clade/pango variants
#70
hbaniecki
closed
3 years ago
0
Refactor scrapper and add scrapping full metadata
#69
piotrpiatyszek
closed
3 years ago
0
policzyć statystyki dla całej Europy
#68
pbiecek
closed
3 years ago
0
content dla twittera
#67
pbiecek
closed
3 years ago
1
weryfikacja czy pango liczone na serwerze jest zgodne z pango liczonym przez gisaid
#66
pbiecek
closed
3 years ago
0
Decrease gg_objects size
#65
piotrpiatyszek
closed
3 years ago
0
Aktualizacja pango na serwerze, tak by uwzględniało wariant indyjski B.1.617
#64
pbiecek
closed
3 years ago
2
nowe warianty w monitorze - indyjski
#63
pbiecek
closed
3 years ago
2
[dev] partial-fix heavy gg_objects
#62
hbaniecki
closed
3 years ago
0
[r] fix heavy gg_objects.rda
#61
hbaniecki
closed
3 years ago
0
nazwy dla monitora
#60
pbiecek
closed
3 years ago
4
add documentation
#59
hbaniecki
closed
3 years ago
0
add 3 demo datasets
#58
hbaniecki
closed
3 years ago
0
Scrapper/update
#57
piotrpiatyszek
closed
3 years ago
0
sposoby wizualizacji zagregowanej informacji o częstości mutacji alertowych
#56
pbiecek
closed
3 years ago
7
Lista mutacji alertowych
#55
pbiecek
closed
3 years ago
5
covar R package
#54
hbaniecki
closed
3 years ago
0
mutations: add mutation charts
#53
maciej-lukasik-va
closed
3 years ago
0
duże metadane dla PL
#52
pbiecek
closed
3 years ago
4
new T-variants
#51
pbiecek
closed
3 years ago
0
fix small bugs in scrapper
#50
HaZdula
closed
3 years ago
0
Use driver.quit() instead of driver.close()
#49
piotrpiatyszek
closed
3 years ago
0
patch R code
#48
hbaniecki
closed
3 years ago
0
Handle exceptions of function for downloading fasta
#47
piotrpiatyszek
closed
3 years ago
0
Handle exceptions at driver initialization
#46
piotrpiatyszek
closed
3 years ago
0
Upgrade checks if fasta file is correctly downloaded
#45
piotrpiatyszek
closed
3 years ago
0
update for new GISAID API
#44
pbiecek
closed
3 years ago
0
compute mutations for all sequences and create mutation.csv
#43
hbaniecki
closed
3 years ago
3
regions sorted in an alphabetical order
#42
hbaniecki
closed
3 years ago
0
unify date format
#41
hbaniecki
closed
3 years ago
1
mi2.ai na https://www.cloudflare.com/
#40
pbiecek
closed
3 years ago
1
one page summary for Europe
#39
pbiecek
closed
3 years ago
2
scrapper documentation
#38
HaZdula
closed
3 years ago
0
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