MIC-DKFZ / basic_unet_example

An example project of how to use a U-Net for segmentation on medical images with PyTorch.
Apache License 2.0
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is trixi installation required? #11

Open jayurbain opened 4 years ago

jayurbain commented 4 years ago

$ pip3 install -r requirements.txt $ python3 -m visdom.server # ran until files downkloaded $ python3 run_train_pipeline.py Traceback (most recent call last): File "run_train_pipeline.py", line 20, in from configs.Config_unet import get_config File "/home/jupyter/basic_unet_example/configs/Config_unet.py", line 20, in from trixi.util import Config ModuleNotFoundError: No module named 'trixi'

Any direction would be appreciated. Thanks.

elpequeno commented 4 years ago

Hey. Sorry for the delay. We are actually just working on the requirements. They are out of date, unfortunately. Try installing just the first 7 lines of requirements.txt (so basically everything that has no comment in front of it. And then try again. Could be that you have to install tensorboard additionally. We hope we can provide an update soon. Let me know if it helps.