MIC-DKFZ / nnDetection

nnDetection is a self-configuring framework for 3D (volumetric) medical object detection which can be applied to new data sets without manual intervention. It includes guides for 12 data sets that were used to develop and evaluate the performance of the proposed method.
Apache License 2.0
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[Question] Defining "test_labels" and "target_class" for custom dataset.json #233

Closed salusanga closed 6 months ago

salusanga commented 7 months ago

Hi, I have a custom dataset for brain metastasis detection. It is a binary task, in the original dataset "1" is the FG and "0" is BG. I brought it to the nnDetection format, with the instances in the masks and the new FG class being "0".

In this context, how should I set "test_labels" and "target_class" in dataset.json?

Thanks a lot! Best, Sara

mibaumgartner commented 6 months ago

Duplicate of #232